
Manipulate your Genomic Observatory Data
MyGOD is a Web-based visual exploration tool. It has been designed to enable scientists to easily build dynamic and composite graphical representations of biodiversity data supplemented with environmental data (ex.: physico-chemical measurements).
Anonymous visitors have access to all data and all types of graphical representations offered by MyGOD. Authenticated users benefit for additional feautures: they can save all the settings of the dashboards they have composed for later reuse, they can promote their dashboards as gallery entries which makes them publicly accessible; and, if they have the appropriate permissions, they can directly import new datasets into MyGOD.
Developement of MyGOD has been funded by the BioGenOuest network, and the Institut Français de Bioinformatique, and been carried out by personnel of the ABiMS platform, with contributions from the Service de Bioinformatique de l'IFREMER and the Mediterranean Institute of Oceanography.
MyGOD can be installed from a Docker image, following the steps documented at https://gitlab.com/mygod-biodiv/mygod-docker
More information about how to format data suitable for import in MyGOD can be found at https://gitlab.com/mygod-biodiv/mygod-data-formats
What's New ?
Available Datasets
Name | Description | Samples | First Sample | Last Sample | Occurrences |
---|---|---|---|---|---|
Blanes 18S - 2004-2013 | Blanes 18S V4 2004-2013 | 120 | Jan. 26, 2004 | Dec. 4, 2013 | 21,909 |
Astan 16S - 2009-2016 | Astan 16S V4 2009-2016 | 70 | Jan. 7, 2009 | Dec. 19, 2011 | 13,023 |
Astan 18S - 2009-2016 | Astan 18S V4 2009-2016 | 190 | Jan. 7, 2009 | Dec. 22, 2016 | 63,060 |
OSD 16S - 2018 | Ocean Sampling Day 16S 2018 | 60 | June 18, 2018 | June 26, 2018 | 6,458 |
OSD 16S - 2019 | Ocean Sampling day 16S 2019 | 47 | June 7, 2019 | June 27, 2019 | 5,248 |
Taxa: 3232
Sequences: 8095
Ranks: Domain Phylum Class Order Family Genus Species
Taxa: 6351
Sequences: 37896
Ranks: Kingdom Supergroup Division Classe Order Family Genus Species
Temperature, Tide Coefficient, Salinity, pH, Dissolved Oxygen, Ammonium (NH4), Nitrate (NO3), Nitrite (NO2), Phosphate (PO4), Chlorophyll A,