Manipulate your Genomic Observatory Data
The goal of VDGOB project is to provide research teams involved in the processing and analysis of data from genomic observatories with the human-machine interfaces necessary to visualize, explore, analyze and interpret their data. This web platform will allow the visualization in time and space of species abundance data from genomic data associated with environmental parameters , notably those measured at several sites of the SOMLIT national service (Service d'Observation en Milieu LITtoral, a national network of 12 marine stations, labeled by INSU (CNRS) since 1996) and those measured in the PHYTOBS projects.
What's New ?
Available Datsets
| Name | Description | Samples | First Sample | Last Sample | Occurrences |
|---|---|---|---|---|---|
| Blanes 18S - 2004-2013 | Blanes 18S V4 2004-2013 | 120 | Jan. 26, 2004 | Dec. 4, 2013 | 21,909 |
| Astan 16S - 2009-2016 | Astan 16S V4 2009-2016 | 70 | Jan. 7, 2009 | Dec. 19, 2011 | 13,023 |
| Astan 18S - 2009-2016 | Astan 18S V4 2009-2016 | 190 | Jan. 7, 2009 | Dec. 22, 2016 | 63,060 |
| OSD 16S - 2018 | Ocean Sampling Day 16S 2018 | 60 | June 18, 2018 | June 26, 2018 | 6,458 |
| OSD 16S - 2019 | Ocean Sampling day 16S 2019 | 47 | June 7, 2019 | June 27, 2019 | 5,248 |
Taxon : 3232
Sequences : 8095
Rank : Domain Phylum Class Order Family Genus Species
Taxon : 6351
Sequences : 37896
Rank : Kingdom Supergroup Division Classe Order Family Genus Species
Temperature, Tide Coefficient, Salinity, pH, Dissolved Oxygen, Ammonium (NH4), Nitrate (NO3), Nitrite (NO2), Phosphate (PO4), Chlorophyll A,